Colloquium

Principles of Chromatin Folding and Condensation: An Active-Polymer Modelling Approach

Speaker: P. B. Sunil Kumar (Department of Physics IIT Madras, Chennai)

Date and time
Venue
Auditorium

Abstract

Chromatin organisation is inherently dynamic and tightly coupled to gene regulation. Within the nucleus, condensed heterochromatin is typically transcriptionally repressed, whereas more open euchromatin is associated with activity. ATP-dependent chromatin remodelers reshape this landscape by promoting loop formation and by sliding, evicting, and rebinding nucleosomes. Although these processes clearly influence genome architecture, their respective contributions to spatial folding and temporal dynamics remain unresolved. In this talk I will present an active-polymer modelling framework for chromatin that explicitly incorporates remodeler-driven activity. We use it to disentangle how loop-mediated compaction and nucleosome-level remodelling set condensation levels and dynamical regimes. The resulting static and dynamic structures are consistent with key experimental observations, offering mechanistic insight into how active processes coordinate chromatin folding across scales.

Short Biography
Prof. Sunil Kumar is a Professor of Physics at IIT Madras, specializing in soft matter, polymer physics, and biological physics. His research bridges statistical mechanics with biological organization, focusing on chromatin dynamics, lipid membrane mechanics, and active matter systems. He is a Fellow of the Indian Academy of Sciences and the Indian National Science Academy, and plays an active role in advancing soft matter research and community building in India and abroad.